1. R-loop-forming regions

• Meta information for genome-wide R-loop mapping data in human: data_sources.gz
• Level 1 R-loop zones in human: level-1_human_R-loops.gz
• Level 2 R-loop zones in human: level-2_human_R-loops.gz
• Level 3 R-loop zones in human: level-3_human_R-loops.gz
• Level 4 R-loop zones in human: level-4_human_R-loops.gz
• Level 5 R-loop zones in human: level-5_human_R-loops.gz
• Level 6 R-loop zones in human: level-6_human_R-loops.gz
• Level 7 R-loop zones in human: level-7_human_R-loops.gz
• Level 8 R-loop zones in human: level-8_human_R-loops.gz
• Level 9 R-loop zones in human: level-9_human_R-loops.gz

2. R-loop Regulators

• Gene list of R-loop regulators: gene_list_of_R-loop_regulators.gz
• Level 1 R-loop zones targeted by individual R-loop regulators: targeted_level-1_R-loops.gz
• Level 2 R-loop zones targeted by individual R-loop regulators: targeted_level-2_R-loops.gz
• Level 3 R-loop zones targeted by individual R-loop regulators: targeted_level-3_R-loops.gz
• Level 4 R-loop zones targeted by individual R-loop regulators: targeted_level-4_R-loops.gz
• Level 5 R-loop zones targeted by individual R-loop regulators: targeted_level-5_R-loops.gz
• Level 6 R-loop zones targeted by individual R-loop regulators: targeted_level-6_R-loops.gz
• Level 7 R-loop zones targeted by individual R-loop regulators: targeted_level-7_R-loops.gz
• Level 8 R-loop zones targeted by individual R-loop regulators: targeted_level-8_R-loops.gz
• Level 9 R-loop zones targeted by individual R-loop regulators: targeted_level-9_R-loops.gz
• Expression levels of human R-loop regulators in GTEx datasets: expression_of_human_R-loop_regulators_in_GTEx.gz
• Expression levels of human R-loop regulators in TCGA datasets: expression_of_human_R-loop_regulators_in_TCGA.gz
• Expression levels of human R-loop regulators in CCLE datasets: expression_of_human_R-loop_regulators_in_CCLE.gz

3. Source code:

• Model running on local servers: DeepER_Model.tar.gz