R-loop Signal Track Settings

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R-loop Signal (All R-loopBase Data tracks)

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All	*Cell Line*	10-14H-Oregon-R-embryos	2-6H-Oregon-R-embryos	Brain	DGRP-379-female	DGRP-379-male	DGRP-732-female	DGRP-732-male	Embryo-E10-14h	Embryo-E14-16h	Embryo-E20-22h	Embryo-E2-4h	Embryo-E8-10h	Larva-L3	Photoreceptor-neuron	S2	w1118-ovaries	*Cell Line*	All
*Technology*																		*Technology*
CUT&Tag																		CUT&Tag
DRIP-seq																		DRIP-seq
MapR																		MapR
ssDRIP-seq																		ssDRIP-seq

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	Cell Line^↓1	Technology^↓2	Treatment^↓3	Replicate^↓4	Library^↓5	Strand^↓6	Track Name^↓7
full Configure	10-14H-Oregon-R-embryos	DRIP-seq	Control	1	ChIP	na	bigwig_12_10-14H-Oregon-R-embryos_Control_DRIP-seq_ChIP_NS_1_PE	Schema
squish Configure	10-14H-Oregon-R-embryos	DRIP-seq	Control	1	ChIP	na	bigbed_12_10-14H-Oregon-R-embryos_Control_DRIP-seq_ChIP_NS_1_PE	Schema
full Configure	10-14H-Oregon-R-embryos	DRIP-seq	Control	1	Input	na	bigwig_12_10-14H-Oregon-R-embryos_Control_DRIP-seq_Input_NS_1_PE	Schema
full Configure	10-14H-Oregon-R-embryos	DRIP-seq	Control	2	ChIP	na	bigwig_13_10-14H-Oregon-R-embryos_Control_DRIP-seq_ChIP_NS_2_PE	Schema
squish Configure	10-14H-Oregon-R-embryos	DRIP-seq	Control	2	ChIP	na	bigbed_13_10-14H-Oregon-R-embryos_Control_DRIP-seq_ChIP_NS_2_PE	Schema
full Configure	10-14H-Oregon-R-embryos	DRIP-seq	Control	2	Input	na	bigwig_13_10-14H-Oregon-R-embryos_Control_DRIP-seq_Input_NS_2_PE	Schema
full Configure	2-6H-Oregon-R-embryos	DRIP-seq	Control	1	ChIP	na	bigwig_10_2-6H-Oregon-R-embryos_Control_DRIP-seq_ChIP_NS_1_PE	Schema
squish Configure	2-6H-Oregon-R-embryos	DRIP-seq	Control	1	ChIP	na	bigbed_10_2-6H-Oregon-R-embryos_Control_DRIP-seq_ChIP_NS_1_PE	Schema
full Configure	2-6H-Oregon-R-embryos	DRIP-seq	Control	1	Input	na	bigwig_10_2-6H-Oregon-R-embryos_Control_DRIP-seq_Input_NS_1_PE	Schema
full Configure	2-6H-Oregon-R-embryos	DRIP-seq	Control	2	ChIP	na	bigwig_11_2-6H-Oregon-R-embryos_Control_DRIP-seq_ChIP_NS_2_PE	Schema
squish Configure	2-6H-Oregon-R-embryos	DRIP-seq	Control	2	ChIP	na	bigbed_11_2-6H-Oregon-R-embryos_Control_DRIP-seq_ChIP_NS_2_PE	Schema
full Configure	2-6H-Oregon-R-embryos	DRIP-seq	Control	2	Input	na	bigwig_11_2-6H-Oregon-R-embryos_Control_DRIP-seq_Input_NS_2_PE	Schema
full Configure	Brain	ssDRIP-seq	Adar-KO	1	ChIP	fwd	bigwig_45_Brain_Adar-KO_ssDRIP-seq_ChIP_SS_1_PE_fwd	Schema
squish Configure	Brain	ssDRIP-seq	Adar-KO	1	ChIP	na	bigbed_45_Brain_Adar-KO_ssDRIP-seq_ChIP_SS_1_PE	Schema
full Configure	Brain	ssDRIP-seq	Adar-KO	1	ChIP	rev	bigwig_45_Brain_Adar-KO_ssDRIP-seq_ChIP_SS_1_PE_rev	Schema
full Configure	Brain	ssDRIP-seq	Adar-KO	2	ChIP	fwd	bigwig_46_Brain_Adar-KO_ssDRIP-seq_ChIP_SS_2_PE_fwd	Schema
squish Configure	Brain	ssDRIP-seq	Adar-KO	2	ChIP	na	bigbed_46_Brain_Adar-KO_ssDRIP-seq_ChIP_SS_2_PE	Schema
full Configure	Brain	ssDRIP-seq	Adar-KO	2	ChIP	rev	bigwig_46_Brain_Adar-KO_ssDRIP-seq_ChIP_SS_2_PE_rev	Schema
full Configure	Brain	ssDRIP-seq	Control	1	ChIP	fwd	bigwig_43_Brain_Control_ssDRIP-seq_ChIP_SS_1_PE_fwd	Schema
squish Configure	Brain	ssDRIP-seq	Control	1	ChIP	na	bigbed_43_Brain_Control_ssDRIP-seq_ChIP_SS_1_PE	Schema
full Configure	Brain	ssDRIP-seq	Control	1	ChIP	rev	bigwig_43_Brain_Control_ssDRIP-seq_ChIP_SS_1_PE_rev	Schema
full Configure	Brain	ssDRIP-seq	Control	2	ChIP	fwd	bigwig_44_Brain_Control_ssDRIP-seq_ChIP_SS_2_PE_fwd	Schema
squish Configure	Brain	ssDRIP-seq	Control	2	ChIP	na	bigbed_44_Brain_Control_ssDRIP-seq_ChIP_SS_2_PE	Schema
full Configure	Brain	ssDRIP-seq	Control	2	ChIP	rev	bigwig_44_Brain_Control_ssDRIP-seq_ChIP_SS_2_PE_rev	Schema
full Configure	DGRP-379-female	DRIP-seq	Control	1	ChIP	na	bigwig_37_DGRP-379-female_Control_DRIP-seq_ChIP_NS_1_PE	Schema
squish Configure	DGRP-379-female	DRIP-seq	Control	1	ChIP	na	bigbed_37_DGRP-379-female_Control_DRIP-seq_ChIP_NS_1_PE	Schema
full Configure	DGRP-379-female	DRIP-seq	Control	2	ChIP	na	bigwig_38_DGRP-379-female_Control_DRIP-seq_ChIP_NS_2_PE	Schema
squish Configure	DGRP-379-female	DRIP-seq	Control	2	ChIP	na	bigbed_38_DGRP-379-female_Control_DRIP-seq_ChIP_NS_2_PE	Schema
full Configure	DGRP-379-male	DRIP-seq	Control	1	ChIP	na	bigwig_35_DGRP-379-male_Control_DRIP-seq_ChIP_NS_1_PE	Schema
squish Configure	DGRP-379-male	DRIP-seq	Control	1	ChIP	na	bigbed_35_DGRP-379-male_Control_DRIP-seq_ChIP_NS_1_PE	Schema
full Configure	DGRP-379-male	DRIP-seq	Control	2	ChIP	na	bigwig_36_DGRP-379-male_Control_DRIP-seq_ChIP_NS_2_PE	Schema
squish Configure	DGRP-379-male	DRIP-seq	Control	2	ChIP	na	bigbed_36_DGRP-379-male_Control_DRIP-seq_ChIP_NS_2_PE	Schema
full Configure	DGRP-732-female	DRIP-seq	Control	1	ChIP	na	bigwig_41_DGRP-732-female_Control_DRIP-seq_ChIP_NS_1_PE	Schema
squish Configure	DGRP-732-female	DRIP-seq	Control	1	ChIP	na	bigbed_41_DGRP-732-female_Control_DRIP-seq_ChIP_NS_1_PE	Schema
full Configure	DGRP-732-female	DRIP-seq	Control	2	ChIP	na	bigwig_42_DGRP-732-female_Control_DRIP-seq_ChIP_NS_2_PE	Schema
squish Configure	DGRP-732-female	DRIP-seq	Control	2	ChIP	na	bigbed_42_DGRP-732-female_Control_DRIP-seq_ChIP_NS_2_PE	Schema
full Configure	DGRP-732-female	DRIP-seq	Control	2	Input	na	bigwig_42_DGRP-732-female_Control_DRIP-seq_Input_NS_2_PE	Schema
full Configure	DGRP-732-male	DRIP-seq	Control	1	ChIP	na	bigwig_39_DGRP-732-male_Control_DRIP-seq_ChIP_NS_1_PE	Schema
squish Configure	DGRP-732-male	DRIP-seq	Control	1	ChIP	na	bigbed_39_DGRP-732-male_Control_DRIP-seq_ChIP_NS_1_PE	Schema
full Configure	DGRP-732-male	DRIP-seq	Control	2	ChIP	na	bigwig_40_DGRP-732-male_Control_DRIP-seq_ChIP_NS_2_PE	Schema
squish Configure	DGRP-732-male	DRIP-seq	Control	2	ChIP	na	bigbed_40_DGRP-732-male_Control_DRIP-seq_ChIP_NS_2_PE	Schema
full Configure	Embryo-E10-14h	CUT&Tag	Control	1	ChIP	na	bigwig_18_Embryo-E10-14h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
squish Configure	Embryo-E10-14h	CUT&Tag	Control	1	ChIP	na	bigbed_18_Embryo-E10-14h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
full Configure	Embryo-E14-16h	CUT&Tag	Control	1	ChIP	na	bigwig_29_Embryo-E14-16h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
full Configure	Embryo-E14-16h	CUT&Tag	Control	1	ChIP	na	bigwig_19_Embryo-E14-16h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
squish Configure	Embryo-E14-16h	CUT&Tag	Control	1	ChIP	na	bigbed_19_Embryo-E14-16h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
squish Configure	Embryo-E14-16h	CUT&Tag	Control	1	ChIP	na	bigbed_29_Embryo-E14-16h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
full Configure	Embryo-E14-16h	CUT&Tag	Control	2	ChIP	na	bigwig_30_Embryo-E14-16h_Control_CUT&Tag_ChIP_NS_2_PE	Schema
full Configure	Embryo-E14-16h	CUT&Tag	Control	2	ChIP	na	bigwig_20_Embryo-E14-16h_Control_CUT&Tag_ChIP_NS_2_PE	Schema
squish Configure	Embryo-E14-16h	CUT&Tag	Control	2	ChIP	na	bigbed_20_Embryo-E14-16h_Control_CUT&Tag_ChIP_NS_2_PE	Schema
squish Configure	Embryo-E14-16h	CUT&Tag	Control	2	ChIP	na	bigbed_30_Embryo-E14-16h_Control_CUT&Tag_ChIP_NS_2_PE	Schema
full Configure	Embryo-E14-16h	CUT&Tag	siSpt6	1	ChIP	na	bigwig_31_Embryo-E14-16h_siSpt6_CUT&Tag_ChIP_NS_1_PE	Schema
squish Configure	Embryo-E14-16h	CUT&Tag	siSpt6	1	ChIP	na	bigbed_31_Embryo-E14-16h_siSpt6_CUT&Tag_ChIP_NS_1_PE	Schema
full Configure	Embryo-E14-16h	CUT&Tag	siSpt6	2	ChIP	na	bigwig_32_Embryo-E14-16h_siSpt6_CUT&Tag_ChIP_NS_2_PE	Schema
squish Configure	Embryo-E14-16h	CUT&Tag	siSpt6	2	ChIP	na	bigbed_32_Embryo-E14-16h_siSpt6_CUT&Tag_ChIP_NS_2_PE	Schema
full Configure	Embryo-E20-22h	CUT&Tag	Control	1	ChIP	na	bigwig_25_Embryo-E20-22h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
squish Configure	Embryo-E20-22h	CUT&Tag	Control	1	ChIP	na	bigbed_25_Embryo-E20-22h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
full Configure	Embryo-E20-22h	CUT&Tag	Control	2	ChIP	na	bigwig_26_Embryo-E20-22h_Control_CUT&Tag_ChIP_NS_2_PE	Schema
squish Configure	Embryo-E20-22h	CUT&Tag	Control	2	ChIP	na	bigbed_26_Embryo-E20-22h_Control_CUT&Tag_ChIP_NS_2_PE	Schema
full Configure	Embryo-E2-4h	CUT&Tag	Control	1	ChIP	na	bigwig_21_Embryo-E2-4h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
squish Configure	Embryo-E2-4h	CUT&Tag	Control	1	ChIP	na	bigbed_21_Embryo-E2-4h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
full Configure	Embryo-E2-4h	CUT&Tag	Control	2	ChIP	na	bigwig_22_Embryo-E2-4h_Control_CUT&Tag_ChIP_NS_2_PE	Schema
squish Configure	Embryo-E2-4h	CUT&Tag	Control	2	ChIP	na	bigbed_22_Embryo-E2-4h_Control_CUT&Tag_ChIP_NS_2_PE	Schema
full Configure	Embryo-E8-10h	CUT&Tag	Control	1	ChIP	na	bigwig_23_Embryo-E8-10h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
squish Configure	Embryo-E8-10h	CUT&Tag	Control	1	ChIP	na	bigbed_23_Embryo-E8-10h_Control_CUT&Tag_ChIP_NS_1_PE	Schema
full Configure	Embryo-E8-10h	CUT&Tag	Control	2	ChIP	na	bigwig_24_Embryo-E8-10h_Control_CUT&Tag_ChIP_NS_2_PE	Schema
squish Configure	Embryo-E8-10h	CUT&Tag	Control	2	ChIP	na	bigbed_24_Embryo-E8-10h_Control_CUT&Tag_ChIP_NS_2_PE	Schema
full Configure	Larva-L3	CUT&Tag	Control	1	ChIP	na	bigwig_27_Larva-L3_Control_CUT&Tag_ChIP_NS_1_PE	Schema
squish Configure	Larva-L3	CUT&Tag	Control	1	ChIP	na	bigbed_27_Larva-L3_Control_CUT&Tag_ChIP_NS_1_PE	Schema
full Configure	Larva-L3	CUT&Tag	Control	2	ChIP	na	bigwig_28_Larva-L3_Control_CUT&Tag_ChIP_NS_2_PE	Schema
squish Configure	Larva-L3	CUT&Tag	Control	2	ChIP	na	bigbed_28_Larva-L3_Control_CUT&Tag_ChIP_NS_2_PE	Schema
full Configure	Photoreceptor-neuron	MapR	Control	1	ChIP	na	bigwig_4_Photoreceptor-neuron_Control_MapR_ChIP_NS_1_PE	Schema
full Configure	Photoreceptor-neuron	MapR	Control	1	ChIP	na	bigwig_1_Photoreceptor-neuron_Control_MapR_ChIP_NS_1_PE	Schema
squish Configure	Photoreceptor-neuron	MapR	Control	1	ChIP	na	bigbed_1_Photoreceptor-neuron_Control_MapR_ChIP_NS_1_PE	Schema
squish Configure	Photoreceptor-neuron	MapR	Control	1	ChIP	na	bigbed_4_Photoreceptor-neuron_Control_MapR_ChIP_NS_1_PE	Schema
full Configure	Photoreceptor-neuron	MapR	Control	2	ChIP	na	bigwig_5_Photoreceptor-neuron_Control_MapR_ChIP_NS_2_PE	Schema
full Configure	Photoreceptor-neuron	MapR	Control	2	ChIP	na	bigwig_2_Photoreceptor-neuron_Control_MapR_ChIP_NS_2_PE	Schema
squish Configure	Photoreceptor-neuron	MapR	Control	2	ChIP	na	bigbed_2_Photoreceptor-neuron_Control_MapR_ChIP_NS_2_PE	Schema
squish Configure	Photoreceptor-neuron	MapR	Control	2	ChIP	na	bigbed_5_Photoreceptor-neuron_Control_MapR_ChIP_NS_2_PE	Schema
full Configure	Photoreceptor-neuron	MapR	Control	3	ChIP	na	bigwig_6_Photoreceptor-neuron_Control_MapR_ChIP_NS_3_PE	Schema
full Configure	Photoreceptor-neuron	MapR	Control	3	ChIP	na	bigwig_3_Photoreceptor-neuron_Control_MapR_ChIP_NS_3_PE	Schema
squish Configure	Photoreceptor-neuron	MapR	Control	3	ChIP	na	bigbed_3_Photoreceptor-neuron_Control_MapR_ChIP_NS_3_PE	Schema
squish Configure	Photoreceptor-neuron	MapR	Control	3	ChIP	na	bigbed_6_Photoreceptor-neuron_Control_MapR_ChIP_NS_3_PE	Schema
full Configure	Photoreceptor-neuron	MapR	Control	4	ChIP	na	bigwig_7_Photoreceptor-neuron_Control_MapR_ChIP_NS_4_PE	Schema
squish Configure	Photoreceptor-neuron	MapR	Control	4	ChIP	na	bigbed_7_Photoreceptor-neuron_Control_MapR_ChIP_NS_4_PE	Schema
full Configure	Photoreceptor-neuron	MapR	Control	5	ChIP	na	bigwig_8_Photoreceptor-neuron_Control_MapR_ChIP_NS_5_PE	Schema
squish Configure	Photoreceptor-neuron	MapR	Control	5	ChIP	na	bigbed_8_Photoreceptor-neuron_Control_MapR_ChIP_NS_5_PE	Schema
full Configure	Photoreceptor-neuron	MapR	Control	6	ChIP	na	bigwig_9_Photoreceptor-neuron_Control_MapR_ChIP_NS_6_PE	Schema
squish Configure	Photoreceptor-neuron	MapR	Control	6	ChIP	na	bigbed_9_Photoreceptor-neuron_Control_MapR_ChIP_NS_6_PE	Schema
full Configure	S2	DRIP-seq	Control	1	ChIP	na	bigwig_14_S2_Control_DRIP-seq_ChIP_NS_1_PE	Schema
squish Configure	S2	DRIP-seq	Control	1	ChIP	na	bigbed_14_S2_Control_DRIP-seq_ChIP_NS_1_PE	Schema
full Configure	S2	DRIP-seq	Control	1	Input	na	bigwig_14_S2_Control_DRIP-seq_Input_NS_1_PE	Schema
full Configure	S2	DRIP-seq	Control	2	ChIP	na	bigwig_15_S2_Control_DRIP-seq_ChIP_NS_2_PE	Schema
squish Configure	S2	DRIP-seq	Control	2	ChIP	na	bigbed_15_S2_Control_DRIP-seq_ChIP_NS_2_PE	Schema
full Configure	S2	DRIP-seq	Control	2	Input	na	bigwig_15_S2_Control_DRIP-seq_Input_NS_2_PE	Schema
full Configure	S2	DRIP-seq	Control	3	ChIP	na	bigwig_16_S2_Control_DRIP-seq_ChIP_NS_3_SE	Schema
squish Configure	S2	DRIP-seq	Control	3	ChIP	na	bigbed_16_S2_Control_DRIP-seq_ChIP_NS_3_SE	Schema
full Configure	S2	DRIP-seq	Control	3	Input	na	bigwig_16_S2_Control_DRIP-seq_Input_NS_3_SE	Schema
full Configure	S2	DRIP-seq	Control	4	ChIP	na	bigwig_17_S2_Control_DRIP-seq_ChIP_NS_4_SE	Schema
squish Configure	S2	DRIP-seq	Control	4	ChIP	na	bigbed_17_S2_Control_DRIP-seq_ChIP_NS_4_SE	Schema
full Configure	S2	DRIP-seq	Control	4	Input	na	bigwig_17_S2_Control_DRIP-seq_Input_NS_4_SE	Schema
full Configure	w1118-ovaries	DRIP-seq	Control	1	ChIP	na	bigwig_33_w1118-ovaries_Control_DRIP-seq_ChIP_NS_1_PE	Schema
squish Configure	w1118-ovaries	DRIP-seq	Control	1	ChIP	na	bigbed_33_w1118-ovaries_Control_DRIP-seq_ChIP_NS_1_PE	Schema
full Configure	w1118-ovaries	DRIP-seq	Control	2	ChIP	na	bigwig_34_w1118-ovaries_Control_DRIP-seq_ChIP_NS_2_PE	Schema
squish Configure	w1118-ovaries	DRIP-seq	Control	2	ChIP	na	bigbed_34_w1118-ovaries_Control_DRIP-seq_ChIP_NS_2_PE	Schema

Description

This section contains all uniformly analyzed bigWig and bigBed tracks collected in R-loopBase. Users can browse and display tracks by selecting specific technologies or cell lines of interest.