AT-skew Track Settings

AT-skew (All R-loopBase Data tracks)

Display mode:

Type of graph:
Track height:	pixels (range: 10 to 128)
Data view scaling:	Always include zero:
Vertical viewing range:	min:	max: (range: 0 to 127)
Transform function:	Transform data points by:
Windowing function:		Smoothing window:	pixels
Negate values:
Draw y indicator lines:	at y = 0.0: at y =

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Data last updated at UCSC: 2021-07-19 03:42:33

Description

The genome was scanned with a 10-bp step sliding window. At each step, the window was extended 50 bp on both sides to form a 110-bp interval, and AT skew was calculated as (A−T)/(A+T). Adjacent windows with identical AT skew were merged into contiguous regions.