Human Gene EGFR (ENST00000342916.7) Description and Page Index
  Description: Homo sapiens epidermal growth factor receptor (EGFR), transcript variant 2, mRNA. (from RefSeq NM_201282)
Gencode Transcript: ENST00000342916.7
Gencode Gene: ENSG00000146648.19
Transcript (Including UTRs)
   Position: hg38 chr7:55,019,032-55,168,635 Size: 149,604 Total Exon Count: 16 Strand: +
Coding Region
   Position: hg38 chr7:55,019,278-55,168,529 Size: 149,252 Coding Exon Count: 16 

Page IndexSequence and LinksUniProtKB CommentsProtein StructureOther NamesMethods
Data last updated at UCSC: 2021-06-20 19:51:40

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:55,019,032-55,168,635)mRNA (may differ from genome)Protein (628 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaExonPrimerGeneCards
HGNCMGIPubMedUniProtKB

-  Comments and Description Text from UniProtKB
  ID: EGFR_HUMAN
DESCRIPTION: RecName: Full=Epidermal growth factor receptor; EC=2.7.10.1; AltName: Full=Proto-oncogene c-ErbB-1; AltName: Full=Receptor tyrosine-protein kinase erbB-1; Flags: Precursor;
FUNCTION: Receptor tyrosine kinase binding ligands of the EGF family and activating several signaling cascades to convert extracellular cues into appropriate cellular responses. Known ligands include EGF, TGFA/TGF-alpha, amphiregulin, epigen/EPGN, BTC/betacellulin, epiregulin/EREG and HBEGF/heparin-binding EGF. Ligand binding triggers receptor homo- and/or heterodimerization and autophosphorylation on key cytoplasmic residues. The phosphorylated receptor recruits adapter proteins like GRB2 which in turn activates complex downstream signaling cascades. Activates at least 4 major downstream signaling cascades including the RAS- RAF-MEK-ERK, PI3 kinase-AKT, PLCgamma-PKC and STATs modules. May also activate the NF-kappa-B signaling cascade. Also directly phosphorylates other proteins like RGS16, activating its GTPase activity and probably coupling the EGF receptor signaling to the G protein-coupled receptor signaling. Also phosphorylates MUC1 and increases its interaction with SRC and CTNNB1/beta-catenin.
FUNCTION: Isoform 2 may act as an antagonist of EGF action.
CATALYTIC ACTIVITY: ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate.
ENZYME REGULATION: Endocytosis and inhibition of the activated EGFR by phosphatases like PTPRJ and PTPRK constitute immediate regulatory mechanisms. Upon EGF-binding phosphorylates EPS15 that regulates EGFR endocytosis and activity. Moreover, inducible feedback inhibitors including LRIG1, SOCS4, SOCS5 and ERRFI1 constitute alternative regulatory mechanisms for the EGFR signaling.
SUBUNIT: Binding of the ligand triggers homo- and/or heterodimerization of the receptor triggering its autophosphorylation. Heterodimer with ERBB2. Interacts with ERRFI1; inhibits dimerization of the kinase domain and autophosphorylation. Part of a complex with ERBB2 and either PIK3C2A or PIK3C2B. Interacts with GRB2; an adapter protein coupling the receptor to downstream signaling pathways. Interacts with GAB2; involved in signaling downstream of EGFR. Interacts with STAT3; mediates EGFR downstream signaling in cell proliferation. Interacts with RIPK1; involved in NF-kappa-B activation. Interacts (autophosphorylated) with CBL; involved in EGFR ubiquitination and regulation. Interacts with SOCS5; regulates EGFR degradation through TCEB1- and TCEB2-mediated ubiquitination and proteasomal degradation. Interacts with PRMT5; methylates EGFR and enhances interaction with PTPN6. Interacts (phosphorylated) with PTPN6; inhibits EGFR-dependent activation of MAPK/ERK. Interacts with COPG1; essential for regulation of EGF- dependent nuclear transport of EGFR by retrograde trafficking from the Golgi to the ER. Interacts with TNK2; this interaction is dependent on EGF stimulation and kinase activity of EGFR. Interacts with PCNA; positively regulates PCNA. Interacts with PELP1. Interacts with MUC1. Interacts with AP2M1. Interacts with FER. May interact with EPS8; mediates EPS8 phosphorylation. Interacts (via SH2 domains) with GRB2, NCK1 and NCK2. Interacts with ATX2.
INTERACTION: Self; NbExp=13; IntAct=EBI-297353, EBI-297353; Q02952:AKAP12; NbExp=2; IntAct=EBI-297353, EBI-2562430; P62158:CALM3; NbExp=3; IntAct=EBI-297353, EBI-397435; P62161:Calm3 (xeno); NbExp=6; IntAct=EBI-297353, EBI-397530; P22681:CBL; NbExp=4; IntAct=EBI-297353, EBI-518228; P22682:Cbl (xeno); NbExp=2; IntAct=EBI-297353, EBI-640919; Q99418:CYTH2; NbExp=5; IntAct=EBI-297353, EBI-448974; P01133:EGF; NbExp=3; IntAct=EBI-297353, EBI-640857; P04626:ERBB2; NbExp=9; IntAct=EBI-297353, EBI-641062; P21860:ERBB3; NbExp=6; IntAct=EBI-297353, EBI-720706; Q15303:ERBB4; NbExp=2; IntAct=EBI-297353, EBI-80371; Q9UJM3:ERRFI1; NbExp=2; IntAct=EBI-297353, EBI-2941912; P03372-4:ESR1; NbExp=4; IntAct=EBI-297353, EBI-4309277; Q14318:FKBP8; NbExp=3; IntAct=EBI-297353, EBI-724839; P60520:GABARAPL2; NbExp=2; IntAct=EBI-297353, EBI-720116; P04406:GAPDH; NbExp=4; IntAct=EBI-297353, EBI-354056; P62993:GRB2; NbExp=12; IntAct=EBI-297353, EBI-401755; Q9UBN7:HDAC6; NbExp=8; IntAct=EBI-297353, EBI-301697; P08107:HSPA1B; NbExp=4; IntAct=EBI-297353, EBI-629985; P46940:IQGAP1; NbExp=4; IntAct=EBI-297353, EBI-297509; Q9Y2H9:MAST1; NbExp=2; IntAct=EBI-297353, EBI-3385920; P08581:MET; NbExp=4; IntAct=EBI-297353, EBI-1039152; O00750:PIK3C2B; NbExp=7; IntAct=EBI-297353, EBI-641107; Q9UJ41:RABGEF1; NbExp=4; IntAct=EBI-297353, EBI-913954; Q13671:RIN1; NbExp=3; IntAct=EBI-297353, EBI-366017; Q01973:ROR1; NbExp=8; IntAct=EBI-297353, EBI-6082337; P29353:SHC1; NbExp=5; IntAct=EBI-297353, EBI-78835; P13866:SLC5A1; NbExp=3; IntAct=EBI-297353, EBI-1772443; P12931:SRC; NbExp=5; IntAct=EBI-297353, EBI-621482; P31948:STIP1; NbExp=2; IntAct=EBI-297353, EBI-1054052; Q8K424:Trpv3 (xeno); NbExp=2; IntAct=EBI-297353, EBI-2650739; P09936:UCHL1; NbExp=2; IntAct=EBI-297353, EBI-714860; Q9P0L0:VAPA; NbExp=2; IntAct=EBI-297353, EBI-1059156; P27348:YWHAQ; NbExp=4; IntAct=EBI-297353, EBI-359854; P63104:YWHAZ; NbExp=4; IntAct=EBI-297353, EBI-347088;
SUBCELLULAR LOCATION: Cell membrane; Single-pass type I membrane protein. Endoplasmic reticulum membrane; Single-pass type I membrane protein. Golgi apparatus membrane; Single-pass type I membrane protein. Nucleus membrane; Single-pass type I membrane protein. Endosome. Endosome membrane. Note=In response to EGF, translocated from the cell membrane to the nucleus via Golgi and ER. Endocytosed upon activation by ligand.
SUBCELLULAR LOCATION: Isoform 2: Secreted.
TISSUE SPECIFICITY: Ubiquitously expressed. Isoform 2 is also expressed in ovarian cancers.
PTM: Phosphorylation at Ser-695 is partial and occurs only if Thr- 693 is phosphorylated. Phosphorylation at Thr-678 and Thr-693 by PRKD1 inhibits EGF-induced MAPK8/JNK1 activation. Dephosphorylation by PTPRJ prevents endocytosis and stabilizes the receptor at the plasma membrane. Autophosphorylation at Tyr-1197 is stimulated by methylation at Arg-1199 and enhances interaction with PTPN6. Autophosphorylation at Tyr-1092 and/or Tyr-1110 recruits STAT3.
PTM: Monoubiquitinated and polyubiquitinated upon EGF stimulation; which does not affect tyrosine kinase activity or signaling capacity but may play a role in lysosomal targeting. Polyubiquitin linkage is mainly through 'Lys-63', but linkage through 'Lys-48', 'Lys-11' and 'Lys-29' also occur.
PTM: Methylated. Methylation at Arg-1199 by PRMT5 positively stimulates phosphorylation at Tyr-1197.
DISEASE: Defects in EGFR are associated with lung cancer (LNCR) [MIM:211980]. LNCR is a common malignancy affecting tissues of the lung. The most common form of lung cancer is non-small cell lung cancer (NSCLC) that can be divided into 3 major histologic subtypes: squamous cell carcinoma, adenocarcinoma, and large cell lung cancer. NSCLC is often diagnosed at an advanced stage and has a poor prognosis.
SIMILARITY: Belongs to the protein kinase superfamily. Tyr protein kinase family. EGF receptor subfamily.
SIMILARITY: Contains 1 protein kinase domain.
WEB RESOURCE: Name=GeneReviews; URL="http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/EGFR";
WEB RESOURCE: Name=NIEHS-SNPs; URL="http://egp.gs.washington.edu/data/egfr/";
WEB RESOURCE: Name=Wikipedia; Note=EGFR entry; URL="http://en.wikipedia.org/wiki/Epidermal_growth_factor_receptor";

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000494 - EGF_rcpt_L
IPR006211 - Furin-like_Cys-rich_dom
IPR006212 - Furin_repeat
IPR009030 - Growth_fac_rcpt
IPR011009 - Kinase-like_dom
IPR000719 - Prot_kinase_cat_dom
IPR017441 - Protein_kinase_ATP_BS
IPR001245 - Ser-Thr/Tyr_kinase_cat_dom
IPR008266 - Tyr_kinase_AS
IPR020635 - Tyr_kinase_cat_dom
IPR016245 - Tyr_kinase_EGF/ERB/XmrK_rcpt

Pfam Domains:
PF00757 - Furin-like cysteine rich region
PF07714 - Protein tyrosine kinase
PF01030 - Receptor L domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help

1DNQ
- Model

1DNR
- Model

1IVO
- X-ray
To conserve bandwidth, only the images from the first 3 structures are shown.
1M14 - X-ray 1M17 - X-ray 1MOX - X-ray
1NQL - X-ray 1XKK - X-ray 1YY9 - X-ray
1Z9I - NMR 2EB2 - X-ray 2EB3 - X-ray
2EXP - Model 2EXQ - Model 2GS2 - X-ray
2GS6 - X-ray 2GS7 - X-ray 2ITN - X-ray
2ITO - X-ray 2ITP - X-ray 2ITQ - X-ray
2ITT - X-ray 2ITU - X-ray 2ITV - X-ray
2ITW - X-ray 2ITX - X-ray 2ITY - X-ray
2ITZ - X-ray 2J5E - X-ray 2J5F - X-ray
2J6M - X-ray 2JIT - X-ray 2JIU - X-ray
2JIV - X-ray 2KS1 - NMR 2RF9 - X-ray
2RFD - X-ray 2RFE - X-ray 2RGP - X-ray
3B2U - X-ray 3B2V - X-ray 3BEL - X-ray
3BUO - X-ray 3C09 - X-ray 3G5V - X-ray
3G5Y - X-ray 3GOP - X-ray 3GT8 - X-ray
3IKA - X-ray 3LZB - X-ray 3NJP - X-ray
3OB2 - X-ray 3OP0 - X-ray 3P0Y - X-ray
3PFV - X-ray 3POZ - X-ray 3QWQ - X-ray
3UG1 - X-ray 3UG2 - X-ray 3VJN - X-ray
3VJO - X-ray 4G5J - X-ray 4G5P - X-ray


ModBase Predicted Comparative 3D Structure on P00533
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