Human Gene ALOX5 (ENST00000542434.5) Description and Page Index
  Description: Homo sapiens arachidonate 5-lipoxygenase (ALOX5), transcript variant 3, mRNA. (from RefSeq NM_001256154)
Gencode Transcript: ENST00000542434.5
Gencode Gene: ENSG00000012779.11
Transcript (Including UTRs)
   Position: hg38 chr10:45,374,176-45,446,119 Size: 71,944 Total Exon Count: 13 Strand: +
Coding Region
   Position: hg38 chr10:45,374,280-45,445,687 Size: 71,408 Coding Exon Count: 13 

Page IndexSequence and LinksUniProtKB CommentsProtein StructureOther NamesMethods
Data last updated at UCSC: 2021-06-20 19:51:40

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr10:45,374,176-45,446,119)mRNA (may differ from genome)Protein (617 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaExonPrimerGeneCards
HGNCMGIPubMedUniProtKB

-  Comments and Description Text from UniProtKB
  ID: LOX5_HUMAN
DESCRIPTION: RecName: Full=Arachidonate 5-lipoxygenase; Short=5-LO; Short=5-lipoxygenase; EC=1.13.11.34;
FUNCTION: Catalyzes the first step in leukotriene biosynthesis, and thereby plays a role in inflammatory processes.
CATALYTIC ACTIVITY: Arachidonate + O(2) = leukotriene A(4) + H(2)O.
COFACTOR: Binds 1 iron ion per subunit.
COFACTOR: Binds 2 calcium ions per subunit (By similarity).
PATHWAY: Lipid metabolism; leukotriene A4 biosynthesis.
SUBUNIT: Interacts with ALOX5AP and LTC4S.
INTERACTION: Q14019:COTL1; NbExp=4; IntAct=EBI-79934, EBI-79926;
SUBCELLULAR LOCATION: Cytoplasm. Nucleus matrix. Nucleus membrane; Peripheral membrane protein. Note=Shuttles between cytoplasm and nucleus. Found exclusively in the nucleus, when phosphorylated on Ser-272. Calcium binding promotes translocation from the cytosol and the nuclear matrix to the nuclear envelope and membrane association.
PTM: Serine phosphorylation by MAPKAPK2 is stimulated by arachidonic acid. Phosphorylation on Ser-523 by PKA has an inhibitory effect. Phosphorylation on Ser-272 prevents export from the nucleus.
SIMILARITY: Belongs to the lipoxygenase family.
SIMILARITY: Contains 1 lipoxygenase domain.
SIMILARITY: Contains 1 PLAT domain.
WEB RESOURCE: Name=Atlas of Genetics and Cytogenetics in Oncology and Haematology; URL="http://atlasgeneticsoncology.org/Genes/ALOX5ID42985ch10q11.html";

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR008976 - Lipase_LipOase
IPR000907 - LipOase
IPR013819 - LipOase_C
IPR020834 - LipOase_CS
IPR020833 - LipOase_Fe_BS
IPR001024 - LipOase_LH2
IPR001885 - LipOase_mml

Pfam Domains:
PF00305 - Lipoxygenase
PF01477 - PLAT/LH2 domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help

2ABV
- Model

3O8Y
- X-ray

3V92
- X-ray
To conserve bandwidth, only the images from the first 3 structures are shown.
3V98 - X-ray 3V99 - X-ray


ModBase Predicted Comparative 3D Structure on P09917
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Other Names for This Gene
  UCSC ID: ENST00000542434.5
Representative RNA: NM_001256154
Protein: P09917 (aka LOX5_HUMAN)

+  Methods, Credits, and Use Restrictions
  Press "+" in the title bar above to open this section.