Human Gene CAPN1 (ENST00000533820.5) Description and Page Index
Description: Homo sapiens calpain 1 (CAPN1), transcript variant 1, mRNA. (from RefSeq NM_001198868)
Gencode Transcript: ENST00000533820.5
Gencode Gene: ENSG00000014216.16
Transcript (Including UTRs)
Position: hg38 chr11:65,181,194-65,212,006 Size: 30,813 Total Exon Count: 22 Strand: +
Coding Region
Position: hg38 chr11:65,182,702-65,211,286 Size: 28,585 Coding Exon Count: 21
Data last updated at UCSC: 2021-06-20 19:51:40
Sequence and Links to Tools and Databases
Press "+" in the title bar above to open this section.
Comments and Description Text from UniProtKB
Press "+" in the title bar above to open this section.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR022684 - Calpain_cysteine_protease
IPR022682 - Calpain_domain_III
IPR022683 - Calpain_III
IPR011992 - EF-hand-like_dom
IPR018247 - EF_Hand_1_Ca_BS
IPR018249 - EF_HAND_2
IPR002048 - EF_hand_Ca-bd
IPR000169 - Pept_cys_AS
IPR001300 - Peptidase_C2_calpain_cat
Pfam Domains: PF01067 - Calpain large subunit, domain III
PF00648 - Calpain family cysteine protease
Protein Data Bank (PDB) 3-D Structure
ModBase Predicted Comparative 3D Structure on P07384
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Other Names for This Gene
UCSC ID: ENST00000533820.5Representative RNA: NM_001198868
Protein: P07384
(aka CAN1_HUMAN)
Methods, Credits, and Use Restrictions
Press "+" in the title bar above to open this section.