Human Gene JADE1 (ENST00000452328.6) Description and Page Index
  Description: Homo sapiens jade family PHD finger 1 (JADE1), transcript variant 3, mRNA. (from RefSeq NM_001287437)
Gencode Transcript: ENST00000452328.6
Gencode Gene: ENSG00000077684.16
Transcript (Including UTRs)
   Position: hg38 chr4:128,809,815-128,875,224 Size: 65,410 Total Exon Count: 11 Strand: +
Coding Region
   Position: hg38 chr4:128,831,759-128,872,262 Size: 40,504 Coding Exon Count: 10 

Page IndexSequence and LinksUniProtKB CommentsProtein StructureOther NamesMethods
Data last updated at UCSC: 2021-06-20 19:51:40

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr4:128,809,815-128,875,224)mRNA (may differ from genome)Protein (830 aa)
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-  Comments and Description Text from UniProtKB
  ID: JADE1_HUMAN
DESCRIPTION: RecName: Full=Protein Jade-1; AltName: Full=PHD finger protein 17;
FUNCTION: Component of the HBO1 complex which has a histone H4- specific acetyltransferase activity, a reduced activity toward histone H3 and is responsible for the bulk of histone H4 acetylation in vivo. Transcriptional coactivator it may also promote acetylation of nucleosomal histone H4 by KAT5. Promotes apoptosis. May act as a renal tumor suppressor.
SUBUNIT: Component of the HBO1 complex composed at least of ING4 or ING5, KAT7/HBO1, MEAF6, and one of PHF15, PHF16 and PHF17. Isoform 3 interacts with VHL and KAT5.
SUBCELLULAR LOCATION: Cytoplasm. Nucleus.
TISSUE SPECIFICITY: Highly expressed in kidney. Also present in pancreas, liver and heart (at protein level). Down-regulated in renal cancer cells.
DOMAIN: The 2 PHD-type zinc fingers are required for transcriptional activity.
SIMILARITY: Belongs to the JADE family.
SIMILARITY: Contains 2 PHD-type zinc fingers.
SEQUENCE CAUTION: Sequence=BAB15371.1; Type=Erroneous initiation; Sequence=BAC11335.1; Type=Erroneous initiation;

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR019542 - Enhancer_polycomb-like_N
IPR019786 - Zinc_finger_PHD-type_CS
IPR011011 - Znf_FYVE_PHD
IPR001965 - Znf_PHD
IPR019787 - Znf_PHD-finger
IPR013083 - Znf_RING/FYVE/PHD

Pfam Domains:
PF10513 - Enhancer of polycomb-like

ModBase Predicted Comparative 3D Structure on Q6IE81
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-  Other Names for This Gene
  UCSC ID: ENST00000452328.6
Representative RNA: NM_001287437
Protein: Q6IE81 (aka JADE1_HUMAN)

+  Methods, Credits, and Use Restrictions
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