Human Gene SDHD (ENST00000375549.8) Description and Page Index
  Description: Homo sapiens succinate dehydrogenase complex subunit D (SDHD), transcript variant 5, non-coding RNA. (from RefSeq NR_077060)
Gencode Transcript: ENST00000375549.8
Gencode Gene: ENSG00000204370.13
Transcript (Including UTRs)
   Position: hg38 chr11:112,086,873-112,095,794 Size: 8,922 Total Exon Count: 4 Strand: +
Coding Region
   Position: hg38 chr11:112,086,908-112,094,970 Size: 8,063 Coding Exon Count: 4 

Page IndexSequence and LinksUniProtKB CommentsProtein StructureOther NamesMethods
Data last updated at UCSC: 2021-06-20 19:51:40

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr11:112,086,873-112,095,794)mRNA (may differ from genome)Protein (159 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaExonPrimerGeneCards
HGNCMGIPubMedUniProtKB

-  Comments and Description Text from UniProtKB
  ID: DHSD_HUMAN
DESCRIPTION: RecName: Full=Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial; Short=CybS; AltName: Full=CII-4; AltName: Full=QPs3; AltName: Full=Succinate dehydrogenase complex subunit D; AltName: Full=Succinate-ubiquinone oxidoreductase cytochrome b small subunit; AltName: Full=Succinate-ubiquinone reductase membrane anchor subunit; Flags: Precursor;
FUNCTION: Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (By similarity).
PATHWAY: Carbohydrate metabolism; tricarboxylic acid cycle.
SUBUNIT: Component of complex II composed of four subunits: the flavoprotein (FP) SDHA, iron-sulfur protein (IP) SDHB, and a cytochrome b560 composed of SDHC and SDHD.
SUBCELLULAR LOCATION: Mitochondrion inner membrane; Multi-pass membrane protein.
DISEASE: Defects in SDHD are a cause of paragangliomas type 1 (PGL1) [MIM:168000]. A neural crest tumor usually derived from the chromoreceptor tissue of a paraganglion. PGL1 is a rare autosomal dominant disorder which is characterized by the development of mostly benign, highly vascular, slowly growing tumors in the head and neck. In the head and neck region, the carotid body is the largest of all paraganglia and is also the most common site of the tumors.
DISEASE: Defects in SDHD are a cause of susceptibility to pheochromocytoma (PCC) [MIM:171300]. A catecholamine-producing tumor of chromaffin tissue of the adrenal medulla or sympathetic paraganglia. The cardinal symptom, reflecting the increased secretion of epinephrine and norepinephrine, is hypertension, which may be persistent or intermittent.
DISEASE: Defects in SDHD may be a cause of susceptibility to intestinal carcinoid tumor (ICT) [MIM:114900]. A yellow, well- differentiated, circumscribed tumor that arises from enterochromaffin cells in the small intestine or, less frequently, in other parts of the gastrointestinal tract.
DISEASE: Defects in SDHD are a cause of paraganglioma and gastric stromal sarcoma (PGGSS) [MIM:606864]; also called Carney-Stratakis syndrome. Gastrointestinal stromal tumors may be sporadic or inherited in an autosomal dominant manner, alone or as a component of a syndrome associated with other tumors, such as in the context of neurofibromatosis type 1 (NF1). Patients have both gastrointestinal stromal tumors and paragangliomas. Susceptibility to the tumors was inherited in an apparently autosomal dominant manner, with incomplete penetrance.
DISEASE: Defects in SDHD are a cause of Cowden-like syndrome (CWDLS) [MIM:612359]. Cowden-like syndrome is a cancer predisposition syndrome associated with elevated risk for tumors of the breast, thyroid, kidney and uterus.
SIMILARITY: Belongs to the CybS family.
WEB RESOURCE: Name=Atlas of Genetics and Cytogenetics in Oncology and Haematology; URL="http://atlasgeneticsoncology.org/Genes/SDHDID390.html";
WEB RESOURCE: Name=GeneReviews; URL="http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/SDHD";
WEB RESOURCE: Name=Wikipedia; Note=SDHD entry; URL="http://en.wikipedia.org/wiki/SDHD";
WEB RESOURCE: Name=TCA Cycle Gene Mutation Database; URL="http://chromium.liacs.nl/LOVD2/SDH/home.php?select_db=SDHD";

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR007992 - Cyt_b_succ_DH_CybS

Pfam Domains:
PF05328 - CybS, succinate dehydrogenase cytochrome B small subunit

ModBase Predicted Comparative 3D Structure on O14521
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-  Other Names for This Gene
  UCSC ID: ENST00000375549.8
Representative RNA: NR_077060
Protein: O14521 (aka DHSD_HUMAN)

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.