Human Gene DCN (ENST00000420120.6) Description and Page Index
  Description: Homo sapiens decorin (DCN), transcript variant B, mRNA. (from RefSeq NM_133504)
Gencode Transcript: ENST00000420120.6
Gencode Gene: ENSG00000011465.18
Transcript (Including UTRs)
   Position: hg38 chr12:91,146,058-91,178,552 Size: 32,495 Total Exon Count: 5 Strand: -
Coding Region
   Position: hg38 chr12:91,146,058-91,178,552 Size: 32,495 Coding Exon Count: 5 

Page IndexSequence and LinksUniProtKB CommentsProtein StructureOther NamesMethods
Data last updated at UCSC: 2021-06-20 19:51:40

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr12:91,146,058-91,178,552)mRNA (may differ from genome)Protein (250 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaExonPrimerGeneCards
HGNCMGIPubMedUniProtKB

-  Comments and Description Text from UniProtKB
  ID: PGS2_HUMAN
DESCRIPTION: RecName: Full=Decorin; AltName: Full=Bone proteoglycan II; AltName: Full=PG-S2; AltName: Full=PG40; Flags: Precursor;
FUNCTION: May affect the rate of fibrils formation.
SUBUNIT: Binds to type I and type II collagen, fibronectin and TGF-beta. Forms a ternary complex with MFAP2 and ELN. Interacts with DPT (By similarity).
SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular matrix.
PTM: The attached glycosaminoglycan chain can be either chondroitin sulfate or dermatan sulfate depending upon the tissue of origin.
DISEASE: Defects in DCN are the cause of congenital stromal corneal dystrophy (CSCD) [MIM:610048]. Corneal dystrophies are inherited, bilateral, primary alterations of the cornea that are not associated with prior inflammation or secondary to systemic disease. Most show autosomal dominant inheritance.
SIMILARITY: Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
SIMILARITY: Contains 12 LRR (leucine-rich) repeats.
WEB RESOURCE: Name=SeattleSNPs; URL="http://pga.gs.washington.edu/data/dcn/";

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR001611 - Leu-rich_rpt
IPR003591 - Leu-rich_rpt_typical-subtyp
IPR000372 - LRR-contain_N
IPR016352 - SLRP_I_decor/aspor/byglycan

Pfam Domains:
PF01462 - Leucine rich repeat N-terminal domain

ModBase Predicted Comparative 3D Structure on P07585
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+  Other Names for This Gene
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-  Methods, Credits, and Use Restrictions
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