Human Gene BDNF (ENST00000395981.7) Description and Page Index
  Description: Homo sapiens brain derived neurotrophic factor (BDNF), transcript variant 2, mRNA. (from RefSeq NM_170732)
Gencode Transcript: ENST00000395981.7
Gencode Gene: ENSG00000176697.20
Transcript (Including UTRs)
   Position: hg38 chr11:27,654,893-27,720,723 Size: 65,831 Total Exon Count: 2 Strand: -
Coding Region
   Position: hg38 chr11:27,657,821-27,658,564 Size: 744 Coding Exon Count: 1 

Page IndexSequence and LinksUniProtKB CommentsProtein StructureOther NamesMethods
Data last updated at UCSC: 2021-06-20 19:51:40

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr11:27,654,893-27,720,723)mRNA (may differ from genome)Protein (247 aa)
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-  Comments and Description Text from UniProtKB
  ID: BDNF_HUMAN
DESCRIPTION: RecName: Full=Brain-derived neurotrophic factor; Short=BDNF; AltName: Full=Abrineurin; Flags: Precursor;
FUNCTION: During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. The versatility of BDNF is emphasized by its contribution to a range of adaptive neuronal responses including long-term potentiation (LTP), long-term depression (LTD), certain forms of short-term synaptic plasticity, as well as homeostatic regulation of intrinsic neuronal excitability.
SUBUNIT: Monomers and homodimers. Binds to NTRK2/TRKB.
INTERACTION: P20783:NTF3; NbExp=1; IntAct=EBI-1026003, EBI-1025994;
SUBCELLULAR LOCATION: Secreted.
TISSUE SPECIFICITY: Brain. Highly expressed in hippocampus, amygdala, cerebral cortex and cerebellum. Also expressed in heart, lung, skeletal muscle, testis, prostate and placenta.
PTM: The propeptide is N-glycosylated and glycosulfated.
PTM: Converted into mature BDNF by plasmin (PLG) (By similarity).
POLYMORPHISM: Variations in BDNF are associated with susceptibility to bulimia nervosa 2 (BULN2) [MIM:610269]. Several genes with an essential role in the regulation of eating behavior and body weight are considered candidates involved in the etiology of eating disorders (ED), but no relevant susceptibility genes with a major effect on anorexia nervosa (AN) or bulimia nervosa (BN) have been identified. BDNF has been implicated in the regulation of food intake and body weight in rodents. A strong association has been reported of the Met-66 allele of the Val-66- Met BDNF variant with restricting AN (ANR) and low minimum body mass index in Spanish patients. Met-66 variant is strongly associated to all ED subtypes (AN, ANR, binge-eating/purging AN and BN) in European patients. Another single nucleotide polymorphism located in the promoter region of the BDNF gene showed an effect on BN and late age at onset of weight loss. These are two variants associated with the pathophysiology of ED in different populations. These variants support a role for BDNF in the susceptibility to aberrant eating behaviors.
DISEASE: Defects in BDNF are a cause of congenital central hypoventilation syndrome (CCHS) [MIM:209880]; also known as congenital failure of autonomic control or Ondine curse. CCHS is a rare disorder characterized by abnormal control of respiration in the absence of neuromuscular or lung disease, or an identifiable brain stem lesion. A deficiency in autonomic control of respiration results in inadequate or negligible ventilatory and arousal responses to hypercapnia and hypoxemia. CCHS is frequently complicated with neurocristopathies such as Hirschsprung disease that occurs in about 16% of CCHS cases.
SIMILARITY: Belongs to the NGF-beta family.
WEB RESOURCE: Name=Wikipedia; Note=BDNF entry; URL="http://en.wikipedia.org/wiki/Brain-derived_neurotrophic_factor";

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR020430 - Brain-der_neurotrophic_factor
IPR020408 - Nerve_growth_factor-like
IPR002072 - Nerve_growth_factor-rel
IPR019846 - Nerve_growth_factor_CS

Pfam Domains:
PF00243 - Nerve growth factor family

Protein Data Bank (PDB) 3-D Structure
MuPIT help

1B8M
- X-ray

1BND
- X-ray


ModBase Predicted Comparative 3D Structure on P23560
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-  Other Names for This Gene
  UCSC ID: ENST00000395981.7
Representative RNA: NM_170732
Protein: P23560 (aka BDNF_HUMAN)

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.