Human Gene MBD1 (ENST00000585595.5) Description and Page Index
  Description: Transcriptional repressor that binds CpG islands in promoters where the DNA is methylated at position 5 of cytosine within CpG dinucleotides. Binding is abolished by the presence of 7-mG that is produced by DNA damage by methylmethanesulfonate (MMS). Acts as transcriptional repressor and plays a role in gene silencing by recruiting AFT7IP, which in turn recruits factors such as the histone methyltransferase SETDB1. Probably forms a complex with SETDB1 and ATF7IP that represses transcription and couples DNA methylation and histone 'Lys-9' trimethylation. Isoform 1 and isoform 2 can also repress transcription from unmethylated promoters. (from UniProt Q9UIS9)
Gencode Transcript: ENST00000585595.5
Gencode Gene: ENSG00000141644.17
Transcript (Including UTRs)
   Position: hg38 chr18:50,269,734-50,281,307 Size: 11,574 Total Exon Count: 18 Strand: -
Coding Region
   Position: hg38 chr18:50,271,501-50,279,992 Size: 8,492 Coding Exon Count: 16 

Page IndexSequence and LinksUniProtKB CommentsProtein StructureOther NamesMethods
Data last updated at UCSC: 2021-06-20 19:51:40

+  Sequence and Links to Tools and Databases
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+  Comments and Description Text from UniProtKB
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-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR016177 - DNA-bd_integrase-typ
IPR001739 - Methyl_CpG_DNA-bd
IPR002857 - Znf_CXXC

Pfam Domains:
PF01429 - Methyl-CpG binding domain
PF02008 - CXXC zinc finger domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help

1D9N
- NMR

1IG4
- NMR


ModBase Predicted Comparative 3D Structure on Q9UIS9
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-  Other Names for This Gene
  UCSC ID: ENST00000585595.5
Representative RNA: AK295401
Protein: Q9UIS9 (aka MBD1_HUMAN)

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.