Human Gene SLC9A1 (ENST00000374086.3) Description and Page Index
  Description: Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction. (from UniProt P19634)
Gencode Transcript: ENST00000374086.3
Gencode Gene: ENSG00000090020.11
Transcript (Including UTRs)
   Position: hg38 chr1:27,105,451-27,154,598 Size: 49,148 Total Exon Count: 5 Strand: -
Coding Region
   Position: hg38 chr1:27,105,702-27,154,334 Size: 48,633 Coding Exon Count: 5 

Page IndexSequence and LinksUniProtKB CommentsProtein StructureOther NamesMethods
Data last updated at UCSC: 2021-06-20 19:51:40

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:27,105,451-27,154,598)mRNA (may differ from genome)Protein (555 aa)
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-  Comments and Description Text from UniProtKB
  ID: SL9A1_HUMAN
DESCRIPTION: RecName: Full=Sodium/hydrogen exchanger 1; AltName: Full=APNH; AltName: Full=Na(+)/H(+) antiporter, amiloride-sensitive; AltName: Full=Na(+)/H(+) exchanger 1; Short=NHE-1; AltName: Full=Solute carrier family 9 member 1;
FUNCTION: Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.
BIOPHYSICOCHEMICAL PROPERTIES: pH dependence: Fully active at acidic pHs, the antiporter is virtually turned off at neutral pH;
SUBUNIT: Oligomer (By similarity). Interacts with calmodulin and TESC. Interacts (via the juxtamembrane region of the cytoplasmic C-terminus domain) with CHP1; the interaction occurs at the plasma membrane in a calcium-dependent manner. Interacts with CHP2; the interaction occurs in a calcium-dependent manner.
SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein. Endoplasmic reticulum membrane; Multi-pass membrane protein (By similarity). Cell membrane; Multi-pass membrane protein. Note=Colocalizes with CHP1 at the reticulum endoplasmic (By similarity). Colocalizes with CHP1 and CHP2 at the plasma membrane.
TISSUE SPECIFICITY: Kidney and intestine.
PTM: Phosphorylated upon DNA damage, probably by ATM or ATR.
PTM: O-glycosylated.
PTM: Ubiquitinated, leading to its degradation by the proteasome. Ubiquitination is reduced by CHP1 (By similarity).
MISCELLANEOUS: Inhibited by amiloride and 5-amino-substituted derivatives and activated in a cooperative fashion by intracellular H(+). In quiescent cells upon growth factor stimulation, the apparent affinity for internal H(+) is increased, resulting in a persistent rise in cytoplasmic pH.
SIMILARITY: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
CAUTION: The region between transmembrane regions M4 and M5 and between M6 and M7 (also termed intracellular loops IL2 and IL4, respectively) seem to be localized at least in part in the membrane. The hydrophobic region H10 is proposed to be located within the membrane.
CAUTION: Although PubMed:12809501 report that TESC-binding results in a decrease in activity, studies with rat SLC9A1 show that TESC- binding results in the maturation and accumulation of SLC9A1 at the cell surface.
CAUTION: Although PubMed:12809501 report that CHP1 and TESC bind to SLC9A1 at different sites, studies with rat SLC9A1 show that they bind at the same C-terminal site.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR006153 - Cation/H_exchanger
IPR018422 - Cation/H_exchanger_CPA1
IPR001970 - Na/H_exchanger_1
IPR004709 - NaH_exchanger

Pfam Domains:
PF00999 - Sodium/hydrogen exchanger family

Protein Data Bank (PDB) 3-D Structure
MuPIT help

1Y4E
- NMR

2BEC
- X-ray

2E30
- NMR
To conserve bandwidth, only the images from the first 3 structures are shown.
2HTG - NMR 2KBV - NMR 2L0E - NMR
2YGG - X-ray


ModBase Predicted Comparative 3D Structure on P19634
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-  Other Names for This Gene
  UCSC ID: ENST00000374086.3
Representative RNA: BC012121
Protein: P19634 (aka SL9A1_HUMAN)

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.