Schema for R-loop Signal

Schema for R-loop Signal - R-loop Signal

Database: mm39 Primary Table: bigbed_54_mESC_Control_CUTTag_ChIP_NS_1_PE Data last updated: 2026-07-02
Big Bed File: /data02/chenjy/rloopbase/ucsc/gbdb/mm39/inhouse-tracks/bigbed/rloop_signal/54_Mouse_mESC_Control_CUT&Tag_ChIP_NS_1_PE.bb
Item Count: 21,255
Format description: Browser Extensible Data

field	example	description
`chrom`	chr1	Reference sequence chromosome or scaffold
`chromStart`	130390177	Start position in chromosome
`chromEnd`	130390872	End position in chromosome
`name`	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_790	Name of item.
`score`	0	Score (0-1000)
`strand`	.	+ or - for strand

Sample Rows

chrom	chromStart	chromEnd	name	strand
chr1	130390177	130390872	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_790	.
chr1	130643381	130643839	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_791	.
chr1	130659558	130659800	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_792	.
chr1	131025375	131025668	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_793	.
chr1	131065789	131066086	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_794	.
chr1	131067066	131067420	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_795	.
chr1	131088841	131089488	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_796	.
chr1	131173125	131173415	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_797	.
chr1	131454946	131455661	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_798	.
chr1	131673137	131673539	54_Mouse_mESC_Control_CUT&Tag_ChIP.flt_peak_799	.

R-loop Signal (rloop_signal_tracks) Track Description


	Description This section contains all uniformly analyzed bigWig and bigBed tracks collected in R-loopBase. Users can browse and display tracks by selecting specific technologies or cell lines of interest.